dbCAN Logo

Cluster: HRGMv2_4050_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4050_23 HRGMv2_4050_23_5 7203 8606 - GH43_9
TF HRGMv2_4050_23 HRGMv2_4050_23_6 8825 9844 + LacI
CAZyme HRGMv2_4050_23 HRGMv2_4050_23_7 10039 12354 + GH31_3
CAZyme HRGMv2_4050_23 HRGMv2_4050_23_8 12351 14297 + GH42
CAZyme HRGMv2_4050_23 HRGMv2_4050_23_9 14294 16708 + GH94
CAZyme HRGMv2_4050_23 HRGMv2_4050_23_10 16793 19684 + GH94
NULL(UNKNOWN) HRGMv2_4050_23 HRGMv2_4050_23_11 19723 22248 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4050_23 HRGMv2_4050_23_12 22306 23667 + 3.A.1.1.10
Gene ID: HRGMv2_4050_23_5
Type: CAZyme
Location: 7203 - 8606 (-)
Gene ID: HRGMv2_4050_23_6
Type: TF
Location: 8825 - 9844 (+)
Gene ID: HRGMv2_4050_23_7
Type: CAZyme
Location: 10039 - 12354 (+)
Gene ID: HRGMv2_4050_23_8
Type: CAZyme
Location: 12351 - 14297 (+)
Gene ID: HRGMv2_4050_23_9
Type: CAZyme
Location: 14294 - 16708 (+)
Gene ID: HRGMv2_4050_23_10
Type: CAZyme
Location: 16793 - 19684 (+)
Gene ID: HRGMv2_4050_23_11
Type:
Location: 19723 - 22248 (+)
Gene ID: HRGMv2_4050_23_12
Type: TC
Location: 22306 - 23667 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List