Cluster: HRGMv2_4050_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4050
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_18 | HRGMv2_4050_18_5 | 2856 | 4319 | - | 2.A.40.1.2 |
| pfam | HRGMv2_4050_18 | HRGMv2_4050_18_6 | 4801 | 5502 | - | SSB |
| CAZyme | HRGMv2_4050_18 | HRGMv2_4050_18_7 | 5604 | 6371 | - | CE4 |
Gene ID: HRGMv2_4050_18_5
Type: TC
Location: 2856 - 4319 (-)
Type: TC
Location: 2856 - 4319 (-)
Gene ID: HRGMv2_4050_18_6
Type: pfam
Location: 4801 - 5502 (-)
Type: pfam
Location: 4801 - 5502 (-)
Gene ID: HRGMv2_4050_18_7
Type: CAZyme
Location: 5604 - 6371 (-)
Type: CAZyme
Location: 5604 - 6371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4050_18_7 | vegetarian > vegan | 1.92071 | 0.03127 |