Cluster: HRGMv2_4050_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4050
- CGC Family ID: CGCFAM_00053
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_12 | HRGMv2_4050_12_23 | 20832 | 21287 | - | 9.A.11.1.1 |
| NULL(UNKNOWN) | HRGMv2_4050_12 | HRGMv2_4050_12_24 | 21642 | 22940 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4050_12 | HRGMv2_4050_12_25 | 23229 | 25082 | - | GH20 |
| CAZyme | HRGMv2_4050_12 | HRGMv2_4050_12_26 | 25111 | 26652 | - | GH32 |
Gene ID: HRGMv2_4050_12_23
Type: TC
Location: 20832 - 21287 (-)
Type: TC
Location: 20832 - 21287 (-)
Gene ID: HRGMv2_4050_12_24
Type:
Location: 21642 - 22940 (+)
Type:
Location: 21642 - 22940 (+)
Gene ID: HRGMv2_4050_12_25
Type: CAZyme
Location: 23229 - 25082 (-)
Type: CAZyme
Location: 23229 - 25082 (-)
Gene ID: HRGMv2_4050_12_26
Type: CAZyme
Location: 25111 - 26652 (-)
Type: CAZyme
Location: 25111 - 26652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4050_12_23 | vegetarian > vegan | 1.14586 | 0.03127 |