Cluster: HRGMv2_4050_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4050
- CGC Family ID: CGCFAM_10530
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4050_63 | HRGMv2_4050_63_3 | 2742 | 4790 | + | CBM4 | CBM4 |
| CAZyme | HRGMv2_4050_63 | HRGMv2_4050_63_4 | 4808 | 5938 | + | GH43_3 |
| STP | HRGMv2_4050_63 | HRGMv2_4050_63_5 | 6026 | 7336 | + | SBP_bac_1 |
| TC | HRGMv2_4050_63 | HRGMv2_4050_63_6 | 7364 | 8281 | + | 3.A.1.1.18 |
| TC | HRGMv2_4050_63 | HRGMv2_4050_63_7 | 8283 | 9140 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_4050_63 | HRGMv2_4050_63_8 | 9286 | 10176 | + | GH43_33 |
| CAZyme | HRGMv2_4050_63 | HRGMv2_4050_63_9 | 10206 | 11297 | + | GH43_3 |
Gene ID: HRGMv2_4050_63_3
Type: CAZyme
Location: 2742 - 4790 (+)
Type: CAZyme
Location: 2742 - 4790 (+)
Gene ID: HRGMv2_4050_63_4
Type: CAZyme
Location: 4808 - 5938 (+)
Type: CAZyme
Location: 4808 - 5938 (+)
Gene ID: HRGMv2_4050_63_5
Type: STP
Location: 6026 - 7336 (+)
Type: STP
Location: 6026 - 7336 (+)
Gene ID: HRGMv2_4050_63_6
Type: TC
Location: 7364 - 8281 (+)
Type: TC
Location: 7364 - 8281 (+)
Gene ID: HRGMv2_4050_63_7
Type: TC
Location: 8283 - 9140 (+)
Type: TC
Location: 8283 - 9140 (+)
Gene ID: HRGMv2_4050_63_8
Type: CAZyme
Location: 9286 - 10176 (+)
Type: CAZyme
Location: 9286 - 10176 (+)
Gene ID: HRGMv2_4050_63_9
Type: CAZyme
Location: 10206 - 11297 (+)
Type: CAZyme
Location: 10206 - 11297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.