Cluster: HRGMv2_4050_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4050
- CGC Family ID: CGCFAM_02478
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_56 | HRGMv2_4050_56_3 | 5629 | 6555 | - | 3.A.1.1.9 |
| TC | HRGMv2_4050_56 | HRGMv2_4050_56_4 | 6557 | 7486 | - | 3.A.1.1.9 |
| STP | HRGMv2_4050_56 | HRGMv2_4050_56_5 | 7486 | 9396 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4050_56 | HRGMv2_4050_56_6 | 9488 | 11065 | - | GH166 |
Gene ID: HRGMv2_4050_56_3
Type: TC
Location: 5629 - 6555 (-)
Type: TC
Location: 5629 - 6555 (-)
Gene ID: HRGMv2_4050_56_4
Type: TC
Location: 6557 - 7486 (-)
Type: TC
Location: 6557 - 7486 (-)
Gene ID: HRGMv2_4050_56_5
Type: STP
Location: 7486 - 9396 (-)
Type: STP
Location: 7486 - 9396 (-)
Gene ID: HRGMv2_4050_56_6
Type: CAZyme
Location: 9488 - 11065 (-)
Type: CAZyme
Location: 9488 - 11065 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.