Cluster: HRGMv2_4050_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4050
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_47 | HRGMv2_4050_47_5 | 3531 | 4343 | - | 3.A.1.105.14 |
| TF | HRGMv2_4050_47 | HRGMv2_4050_47_6 | 4336 | 5136 | - | MerR |
| NULL(UNKNOWN) | HRGMv2_4050_47 | HRGMv2_4050_47_7 | 5311 | 5505 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4050_47 | HRGMv2_4050_47_8 | 5701 | 6930 | - | GH109 |
| TF | HRGMv2_4050_47 | HRGMv2_4050_47_9 | 7067 | 7915 | + | 0035607 | 0036286 |
| NULL(UNKNOWN) | HRGMv2_4050_47 | HRGMv2_4050_47_10 | 7976 | 9106 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4050_47 | HRGMv2_4050_47_11 | 9247 | 10677 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_4050_47_5
Type: TC
Location: 3531 - 4343 (-)
Type: TC
Location: 3531 - 4343 (-)
Gene ID: HRGMv2_4050_47_6
Type: TF
Location: 4336 - 5136 (-)
Type: TF
Location: 4336 - 5136 (-)
Gene ID: HRGMv2_4050_47_7
Type:
Location: 5311 - 5505 (-)
Type:
Location: 5311 - 5505 (-)
Gene ID: HRGMv2_4050_47_8
Type: CAZyme
Location: 5701 - 6930 (-)
Type: CAZyme
Location: 5701 - 6930 (-)
Gene ID: HRGMv2_4050_47_9
Type: TF
Location: 7067 - 7915 (+)
Type: TF
Location: 7067 - 7915 (+)
Gene ID: HRGMv2_4050_47_10
Type:
Location: 7976 - 9106 (-)
Type:
Location: 7976 - 9106 (-)
Gene ID: HRGMv2_4050_47_11
Type: TC
Location: 9247 - 10677 (+)
Type: TC
Location: 9247 - 10677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.