Cluster: HRGMv2_4050_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4050
- CGC Family ID: CGCFAM_09785
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_46 | HRGMv2_4050_46_2 | 1650 | 2558 | + | 3.A.1.1.4 |
| TC | HRGMv2_4050_46 | HRGMv2_4050_46_3 | 2569 | 3483 | + | 3.A.1.1.25 |
| NULL(UNKNOWN) | HRGMv2_4050_46 | HRGMv2_4050_46_4 | 3497 | 6595 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4050_46 | HRGMv2_4050_46_5 | 6609 | 8594 | + | GH163 |
| pfam | HRGMv2_4050_46 | HRGMv2_4050_46_6 | 8643 | 11957 | + | Big_2 | Big_2 |
| pfam | HRGMv2_4050_46 | HRGMv2_4050_46_7 | 12029 | 12802 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4050_46 | HRGMv2_4050_46_8 | 12809 | 13549 | + | GH177 |
Gene ID: HRGMv2_4050_46_2
Type: TC
Location: 1650 - 2558 (+)
Type: TC
Location: 1650 - 2558 (+)
Gene ID: HRGMv2_4050_46_3
Type: TC
Location: 2569 - 3483 (+)
Type: TC
Location: 2569 - 3483 (+)
Gene ID: HRGMv2_4050_46_4
Type:
Location: 3497 - 6595 (+)
Type:
Location: 3497 - 6595 (+)
Gene ID: HRGMv2_4050_46_5
Type: CAZyme
Location: 6609 - 8594 (+)
Type: CAZyme
Location: 6609 - 8594 (+)
Gene ID: HRGMv2_4050_46_6
Type: pfam
Location: 8643 - 11957 (+)
Type: pfam
Location: 8643 - 11957 (+)
Gene ID: HRGMv2_4050_46_7
Type: pfam
Location: 12029 - 12802 (+)
Type: pfam
Location: 12029 - 12802 (+)
Gene ID: HRGMv2_4050_46_8
Type: CAZyme
Location: 12809 - 13549 (+)
Type: CAZyme
Location: 12809 - 13549 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.