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Cluster: HRGMv2_4050_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4050_39 HRGMv2_4050_39_2 3085 3996 + GH43_32
TF HRGMv2_4050_39 HRGMv2_4050_39_3 4649 5539 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_4050_39 HRGMv2_4050_39_4 5711 7192 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4050_39 HRGMv2_4050_39_5 7309 8247 + 3.A.1.1.18
TC HRGMv2_4050_39 HRGMv2_4050_39_6 8260 9150 + 3.A.1.1.18
CAZyme HRGMv2_4050_39 HRGMv2_4050_39_7 9741 11879 + GH95
NULL(UNKNOWN) HRGMv2_4050_39 HRGMv2_4050_39_8 12249 12647 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4050_39 HRGMv2_4050_39_9 12810 14249 + 2.A.66.2.14
Gene ID: HRGMv2_4050_39_2
Type: CAZyme
Location: 3085 - 3996 (+)
Gene ID: HRGMv2_4050_39_3
Type: TF
Location: 4649 - 5539 (-)
Gene ID: HRGMv2_4050_39_4
Type:
Location: 5711 - 7192 (+)
Gene ID: HRGMv2_4050_39_5
Type: TC
Location: 7309 - 8247 (+)
Gene ID: HRGMv2_4050_39_6
Type: TC
Location: 8260 - 9150 (+)
Gene ID: HRGMv2_4050_39_7
Type: CAZyme
Location: 9741 - 11879 (+)
Gene ID: HRGMv2_4050_39_8
Type:
Location: 12249 - 12647 (+)
Gene ID: HRGMv2_4050_39_9
Type: TC
Location: 12810 - 14249 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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