Cluster: HRGMv2_4050_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4050
- CGC Family ID: CGCFAM_03575
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_31 | HRGMv2_4050_31_13 | 11360 | 12925 | + | 3.A.2.1.5 |
| TC | HRGMv2_4050_31 | HRGMv2_4050_31_14 | 12922 | 13773 | + | 3.A.2.1.1 |
| TC | HRGMv2_4050_31 | HRGMv2_4050_31_15 | 13786 | 15168 | + | 3.A.2.1.5 |
| pfam | HRGMv2_4050_31 | HRGMv2_4050_31_16 | 15165 | 15569 | + | ATP-synt_DE_N |
| CAZyme | HRGMv2_4050_31 | HRGMv2_4050_31_17 | 15813 | 17411 | - | GH20 |
Gene ID: HRGMv2_4050_31_13
Type: TC
Location: 11360 - 12925 (+)
Type: TC
Location: 11360 - 12925 (+)
Gene ID: HRGMv2_4050_31_14
Type: TC
Location: 12922 - 13773 (+)
Type: TC
Location: 12922 - 13773 (+)
Gene ID: HRGMv2_4050_31_15
Type: TC
Location: 13786 - 15168 (+)
Type: TC
Location: 13786 - 15168 (+)
Gene ID: HRGMv2_4050_31_16
Type: pfam
Location: 15165 - 15569 (+)
Type: pfam
Location: 15165 - 15569 (+)
Gene ID: HRGMv2_4050_31_17
Type: CAZyme
Location: 15813 - 17411 (-)
Type: CAZyme
Location: 15813 - 17411 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.