Cluster: HRGMv2_4049_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4049
- CGC Family ID: CGCFAM_01012
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4049_23 | HRGMv2_4049_23_4 | 3135 | 6137 | + | 3.A.12.1.1 |
| pfam | HRGMv2_4049_23 | HRGMv2_4049_23_5 | 6140 | 7492 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_4049_23 | HRGMv2_4049_23_6 | 7659 | 8267 | + | 4.F.1.1.8 |
| pfam | HRGMv2_4049_23 | HRGMv2_4049_23_7 | 8360 | 9349 | + | RecA | Rad51 | RecA_C |
| CAZyme | HRGMv2_4049_23 | HRGMv2_4049_23_8 | 9540 | 11849 | - | GT51 |
Gene ID: HRGMv2_4049_23_4
Type: TC
Location: 3135 - 6137 (+)
Type: TC
Location: 3135 - 6137 (+)
Gene ID: HRGMv2_4049_23_5
Type: pfam
Location: 6140 - 7492 (+)
Type: pfam
Location: 6140 - 7492 (+)
Gene ID: HRGMv2_4049_23_6
Type: TC
Location: 7659 - 8267 (+)
Type: TC
Location: 7659 - 8267 (+)
Gene ID: HRGMv2_4049_23_7
Type: pfam
Location: 8360 - 9349 (+)
Type: pfam
Location: 8360 - 9349 (+)
Gene ID: HRGMv2_4049_23_8
Type: CAZyme
Location: 9540 - 11849 (-)
Type: CAZyme
Location: 9540 - 11849 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1242
Genus
CAKVNM01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.