Cluster: HRGMv2_4049_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4049
- CGC Family ID: CGCFAM_01963
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4049_4 | HRGMv2_4049_4_10 | 12492 | 14048 | - | 3.A.1.147.6 |
| TC | HRGMv2_4049_4 | HRGMv2_4049_4_11 | 14041 | 14748 | - | 3.A.1.147.6 |
| TF | HRGMv2_4049_4 | HRGMv2_4049_4_12 | 14750 | 14956 | - | SpoVT_AbrB |
| TC | HRGMv2_4049_4 | HRGMv2_4049_4_13 | 15071 | 16066 | - | 2.A.119.2.2 |
| CAZyme | HRGMv2_4049_4 | HRGMv2_4049_4_14 | 16199 | 17824 | - | GT2 |
Gene ID: HRGMv2_4049_4_10
Type: TC
Location: 12492 - 14048 (-)
Type: TC
Location: 12492 - 14048 (-)
Gene ID: HRGMv2_4049_4_11
Type: TC
Location: 14041 - 14748 (-)
Type: TC
Location: 14041 - 14748 (-)
Gene ID: HRGMv2_4049_4_12
Type: TF
Location: 14750 - 14956 (-)
Type: TF
Location: 14750 - 14956 (-)
Gene ID: HRGMv2_4049_4_13
Type: TC
Location: 15071 - 16066 (-)
Type: TC
Location: 15071 - 16066 (-)
Gene ID: HRGMv2_4049_4_14
Type: CAZyme
Location: 16199 - 17824 (-)
Type: CAZyme
Location: 16199 - 17824 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1242
Genus
CAKVNM01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.