Cluster: HRGMv2_4047_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4047
- CGC Family ID: CGCFAM_07663
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_2 | 1036 | 2379 | - | GH10 |
| TF | HRGMv2_4047_4 | HRGMv2_4047_4_3 | 2508 | 3272 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_4 | 3401 | 4729 | + | GH13 |
| NULL(UNKNOWN) | HRGMv2_4047_4 | HRGMv2_4047_4_5 | 6024 | 6866 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4047_4 | HRGMv2_4047_4_6 | 7061 | 7288 | + | 9.A.8.1.6 |
| TC | HRGMv2_4047_4 | HRGMv2_4047_4_7 | 7285 | 9456 | + | 9.A.8.1.6 |
Gene ID: HRGMv2_4047_4_2
Type: CAZyme
Location: 1036 - 2379 (-)
Type: CAZyme
Location: 1036 - 2379 (-)
Gene ID: HRGMv2_4047_4_3
Type: TF
Location: 2508 - 3272 (+)
Type: TF
Location: 2508 - 3272 (+)
Gene ID: HRGMv2_4047_4_4
Type: CAZyme
Location: 3401 - 4729 (+)
Type: CAZyme
Location: 3401 - 4729 (+)
Gene ID: HRGMv2_4047_4_5
Type:
Location: 6024 - 6866 (+)
Type:
Location: 6024 - 6866 (+)
Gene ID: HRGMv2_4047_4_6
Type: TC
Location: 7061 - 7288 (+)
Type: TC
Location: 7061 - 7288 (+)
Gene ID: HRGMv2_4047_4_7
Type: TC
Location: 7285 - 9456 (+)
Type: TC
Location: 7285 - 9456 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944363555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.