Cluster: HRGMv2_4047_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4047
- CGC Family ID: CGCFAM_03076
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4047_1 | HRGMv2_4047_1_165 | 186571 | 187386 | + | 1.A.23.2.1 |
| pfam | HRGMv2_4047_1 | HRGMv2_4047_1_166 | 187580 | 188410 | + | DegV |
| TF | HRGMv2_4047_1 | HRGMv2_4047_1_167 | 188642 | 189085 | + | MarR |
| TC | HRGMv2_4047_1 | HRGMv2_4047_1_168 | 189082 | 190797 | + | 3.A.1.135.7 |
| TC | HRGMv2_4047_1 | HRGMv2_4047_1_169 | 190790 | 192553 | + | 3.A.1.135.5 |
| CAZyme | HRGMv2_4047_1 | HRGMv2_4047_1_170 | 192751 | 195225 | + | GH2 |
Gene ID: HRGMv2_4047_1_165
Type: TC
Location: 186571 - 187386 (+)
Type: TC
Location: 186571 - 187386 (+)
Gene ID: HRGMv2_4047_1_166
Type: pfam
Location: 187580 - 188410 (+)
Type: pfam
Location: 187580 - 188410 (+)
Gene ID: HRGMv2_4047_1_167
Type: TF
Location: 188642 - 189085 (+)
Type: TF
Location: 188642 - 189085 (+)
Gene ID: HRGMv2_4047_1_168
Type: TC
Location: 189082 - 190797 (+)
Type: TC
Location: 189082 - 190797 (+)
Gene ID: HRGMv2_4047_1_169
Type: TC
Location: 190790 - 192553 (+)
Type: TC
Location: 190790 - 192553 (+)
Gene ID: HRGMv2_4047_1_170
Type: CAZyme
Location: 192751 - 195225 (+)
Type: CAZyme
Location: 192751 - 195225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944363555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.