Cluster: HRGMv2_4047_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4047
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4047_25 | HRGMv2_4047_25_14 | 16652 | 18160 | - | GH77 |
| CAZyme | HRGMv2_4047_25 | HRGMv2_4047_25_15 | 18214 | 20463 | - | GT35 |
| TC | HRGMv2_4047_25 | HRGMv2_4047_25_16 | 20466 | 21323 | - | 3.A.1.1.27 |
| TC | HRGMv2_4047_25 | HRGMv2_4047_25_17 | 21323 | 22678 | - | 3.A.1.1.27 |
| STP | HRGMv2_4047_25 | HRGMv2_4047_25_18 | 22692 | 24161 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4047_25 | HRGMv2_4047_25_19 | 24166 | 25809 | - | CBM34 | GH13_20 |
Gene ID: HRGMv2_4047_25_14
Type: CAZyme
Location: 16652 - 18160 (-)
Type: CAZyme
Location: 16652 - 18160 (-)
Gene ID: HRGMv2_4047_25_15
Type: CAZyme
Location: 18214 - 20463 (-)
Type: CAZyme
Location: 18214 - 20463 (-)
Gene ID: HRGMv2_4047_25_16
Type: TC
Location: 20466 - 21323 (-)
Type: TC
Location: 20466 - 21323 (-)
Gene ID: HRGMv2_4047_25_17
Type: TC
Location: 21323 - 22678 (-)
Type: TC
Location: 21323 - 22678 (-)
Gene ID: HRGMv2_4047_25_18
Type: STP
Location: 22692 - 24161 (-)
Type: STP
Location: 22692 - 24161 (-)
Gene ID: HRGMv2_4047_25_19
Type: CAZyme
Location: 24166 - 25809 (-)
Type: CAZyme
Location: 24166 - 25809 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944363555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4047_25_14 | vegetarian > omnivore | 1.08902 | 0.01232 |
| HRGMv2_4047_25_14 | vegetarian > vegan | 1.45952 | 0.00933 |
| HRGMv2_4047_25_15 | vegetarian > vegan | 1.30798 | 0.00933 |