Cluster: HRGMv2_4047_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4047
- CGC Family ID: CGCFAM_04008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4047_23 | HRGMv2_4047_23_2 | 1362 | 2726 | + | GH1 |
| STP | HRGMv2_4047_23 | HRGMv2_4047_23_3 | 2744 | 4276 | + | SBP_bac_1 |
| pfam | HRGMv2_4047_23 | HRGMv2_4047_23_4 | 4287 | 5258 | + | BPD_transp_1 |
| TC | HRGMv2_4047_23 | HRGMv2_4047_23_5 | 5269 | 6159 | + | 3.A.1.1.39 |
Gene ID: HRGMv2_4047_23_2
Type: CAZyme
Location: 1362 - 2726 (+)
Type: CAZyme
Location: 1362 - 2726 (+)
Gene ID: HRGMv2_4047_23_3
Type: STP
Location: 2744 - 4276 (+)
Type: STP
Location: 2744 - 4276 (+)
Gene ID: HRGMv2_4047_23_4
Type: pfam
Location: 4287 - 5258 (+)
Type: pfam
Location: 4287 - 5258 (+)
Gene ID: HRGMv2_4047_23_5
Type: TC
Location: 5269 - 6159 (+)
Type: TC
Location: 5269 - 6159 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944363555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.