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Cluster: HRGMv2_4047_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4047_22 HRGMv2_4047_22_13 9190 9960 + GT2
pfam HRGMv2_4047_22 HRGMv2_4047_22_14 9962 11281 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_4047_22 HRGMv2_4047_22_15 11310 12116 + Glycos_transf_2
CAZyme HRGMv2_4047_22 HRGMv2_4047_22_16 12116 13336 + GT4
pfam HRGMv2_4047_22 HRGMv2_4047_22_17 13411 14691 + Wzy_C
CAZyme HRGMv2_4047_22 HRGMv2_4047_22_18 14675 15850 + GT4
pfam HRGMv2_4047_22 HRGMv2_4047_22_19 15825 16994 + Glycos_transf_1 | Glyco_transf_4
TC HRGMv2_4047_22 HRGMv2_4047_22_20 17114 18391 + 2.A.66.5.3
Gene ID: HRGMv2_4047_22_13
Type: CAZyme
Location: 9190 - 9960 (+)
Gene ID: HRGMv2_4047_22_14
Type: pfam
Location: 9962 - 11281 (+)
Gene ID: HRGMv2_4047_22_15
Type: pfam
Location: 11310 - 12116 (+)
Gene ID: HRGMv2_4047_22_16
Type: CAZyme
Location: 12116 - 13336 (+)
Gene ID: HRGMv2_4047_22_17
Type: pfam
Location: 13411 - 14691 (+)
Gene ID: HRGMv2_4047_22_18
Type: CAZyme
Location: 14675 - 15850 (+)
Gene ID: HRGMv2_4047_22_19
Type: pfam
Location: 15825 - 16994 (+)
Gene ID: HRGMv2_4047_22_20
Type: TC
Location: 17114 - 18391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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