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Cluster: HRGMv2_4047_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4047_15 HRGMv2_4047_15_8 7717 11265 + CBM66 | GH32
TF HRGMv2_4047_15 HRGMv2_4047_15_9 11252 12244 + LacI
TC HRGMv2_4047_15 HRGMv2_4047_15_10 12398 13717 + 3.A.1.1.20
TC HRGMv2_4047_15 HRGMv2_4047_15_11 13739 14722 + 3.A.1.1.20
TC HRGMv2_4047_15 HRGMv2_4047_15_12 14724 15608 + 3.A.1.1.20
CAZyme HRGMv2_4047_15 HRGMv2_4047_15_13 15625 18087 + GH32
CAZyme HRGMv2_4047_15 HRGMv2_4047_15_14 18100 19974 + CBM38 | CBM38 | CBM38
NULL(UNKNOWN) HRGMv2_4047_15 HRGMv2_4047_15_15 19988 20137 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4047_15 HRGMv2_4047_15_16 20134 21984 + CBM38
CAZyme HRGMv2_4047_15 HRGMv2_4047_15_17 22046 23407 + GH32
Gene ID: HRGMv2_4047_15_8
Type: CAZyme
Location: 7717 - 11265 (+)
Gene ID: HRGMv2_4047_15_9
Type: TF
Location: 11252 - 12244 (+)
Gene ID: HRGMv2_4047_15_10
Type: TC
Location: 12398 - 13717 (+)
Gene ID: HRGMv2_4047_15_11
Type: TC
Location: 13739 - 14722 (+)
Gene ID: HRGMv2_4047_15_12
Type: TC
Location: 14724 - 15608 (+)
Gene ID: HRGMv2_4047_15_13
Type: CAZyme
Location: 15625 - 18087 (+)
Gene ID: HRGMv2_4047_15_14
Type: CAZyme
Location: 18100 - 19974 (+)
Gene ID: HRGMv2_4047_15_15
Type:
Location: 19988 - 20137 (+)
Gene ID: HRGMv2_4047_15_16
Type: CAZyme
Location: 20134 - 21984 (+)
Gene ID: HRGMv2_4047_15_17
Type: CAZyme
Location: 22046 - 23407 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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