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Cluster: HRGMv2_4047_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4047_7 HRGMv2_4047_7_3 626 2533 - GH163
NULL(UNKNOWN) HRGMv2_4047_7 HRGMv2_4047_7_4 2651 5386 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4047_7 HRGMv2_4047_7_5 5400 8423 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4047_7 HRGMv2_4047_7_6 8440 9372 - 3.A.1.1.20
pfam HRGMv2_4047_7 HRGMv2_4047_7_7 9374 10327 - BPD_transp_1
NULL(UNKNOWN) HRGMv2_4047_7 HRGMv2_4047_7_8 10349 12025 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4047_7 HRGMv2_4047_7_9 12310 14826 + GH94
pfam HRGMv2_4047_7 HRGMv2_4047_7_10 14927 16165 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_4047_7 HRGMv2_4047_7_11 16216 18705 + GH31_15
Gene ID: HRGMv2_4047_7_3
Type: CAZyme
Location: 626 - 2533 (-)
Gene ID: HRGMv2_4047_7_4
Type:
Location: 2651 - 5386 (-)
Gene ID: HRGMv2_4047_7_5
Type:
Location: 5400 - 8423 (-)
Gene ID: HRGMv2_4047_7_6
Type: TC
Location: 8440 - 9372 (-)
Gene ID: HRGMv2_4047_7_7
Type: pfam
Location: 9374 - 10327 (-)
Gene ID: HRGMv2_4047_7_8
Type:
Location: 10349 - 12025 (-)
Gene ID: HRGMv2_4047_7_9
Type: CAZyme
Location: 12310 - 14826 (+)
Gene ID: HRGMv2_4047_7_10
Type: pfam
Location: 14927 - 16165 (+)
Gene ID: HRGMv2_4047_7_11
Type: CAZyme
Location: 16216 - 18705 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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