Cluster: HRGMv2_4047_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4047
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4047_5 | HRGMv2_4047_5_57 | 76391 | 78010 | - | GH78 |
| peptidase | HRGMv2_4047_5 | HRGMv2_4047_5_58 | 78050 | 79342 | - | S41.UNA |
| pfam | HRGMv2_4047_5 | HRGMv2_4047_5_59 | 79360 | 80412 | - | HTH_30 | GGDEF_2 |
| TC | HRGMv2_4047_5 | HRGMv2_4047_5_60 | 80543 | 81388 | - | 2.A.119.2.1 |
| NULL(UNKNOWN) | HRGMv2_4047_5 | HRGMv2_4047_5_61 | 81549 | 82226 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4047_5 | HRGMv2_4047_5_62 | 82395 | 84563 | - | Flg_new | Flg_new | Flg_new | Flg_new | LRR_5 | LRR_5 | LRR_5 | Flg_new_2 | Flg_new_2 | Flg_new_2 |
| TC | HRGMv2_4047_5 | HRGMv2_4047_5_63 | 84730 | 86133 | - | 3.A.1.1.26 |
| pfam | HRGMv2_4047_5 | HRGMv2_4047_5_64 | 86275 | 87177 | - | OTCace | OTCace_N |
| STP | HRGMv2_4047_5 | HRGMv2_4047_5_65 | 87202 | 87777 | - | HD |
| TC | HRGMv2_4047_5 | HRGMv2_4047_5_66 | 88006 | 89124 | + | 2.A.88.3.1 |
| STP | HRGMv2_4047_5 | HRGMv2_4047_5_67 | 89205 | 89741 | - | Nitroreductase |
| TC | HRGMv2_4047_5 | HRGMv2_4047_5_68 | 89800 | 90636 | - | 9.B.149.1.6 |
Gene ID: HRGMv2_4047_5_57
Type: CAZyme
Location: 76391 - 78010 (-)
Type: CAZyme
Location: 76391 - 78010 (-)
Gene ID: HRGMv2_4047_5_58
Type: peptidase
Location: 78050 - 79342 (-)
Type: peptidase
Location: 78050 - 79342 (-)
Gene ID: HRGMv2_4047_5_59
Type: pfam
Location: 79360 - 80412 (-)
Type: pfam
Location: 79360 - 80412 (-)
Gene ID: HRGMv2_4047_5_60
Type: TC
Location: 80543 - 81388 (-)
Type: TC
Location: 80543 - 81388 (-)
Gene ID: HRGMv2_4047_5_61
Type:
Location: 81549 - 82226 (-)
Type:
Location: 81549 - 82226 (-)
Gene ID: HRGMv2_4047_5_62
Type: pfam
Location: 82395 - 84563 (-)
Type: pfam
Location: 82395 - 84563 (-)
Gene ID: HRGMv2_4047_5_63
Type: TC
Location: 84730 - 86133 (-)
Type: TC
Location: 84730 - 86133 (-)
Gene ID: HRGMv2_4047_5_64
Type: pfam
Location: 86275 - 87177 (-)
Type: pfam
Location: 86275 - 87177 (-)
Gene ID: HRGMv2_4047_5_65
Type: STP
Location: 87202 - 87777 (-)
Type: STP
Location: 87202 - 87777 (-)
Gene ID: HRGMv2_4047_5_66
Type: TC
Location: 88006 - 89124 (+)
Type: TC
Location: 88006 - 89124 (+)
Gene ID: HRGMv2_4047_5_67
Type: STP
Location: 89205 - 89741 (-)
Type: STP
Location: 89205 - 89741 (-)
Gene ID: HRGMv2_4047_5_68
Type: TC
Location: 89800 - 90636 (-)
Type: TC
Location: 89800 - 90636 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944363555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.