Cluster: HRGMv2_4047_CGC10
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_4047
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_71 | 83932 | 86700 | - | GH2 |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_72 | 87296 | 88240 | + | GT108 |
| NULL(UNKNOWN) | HRGMv2_4047_4 | HRGMv2_4047_4_73 | 88334 | 89992 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4047_4 | HRGMv2_4047_4_74 | 90087 | 91085 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4047_4 | HRGMv2_4047_4_75 | 91072 | 92091 | + | 3.A.1.1.20 |
| NULL(UNKNOWN) | HRGMv2_4047_4 | HRGMv2_4047_4_76 | 92121 | 96554 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_77 | 96567 | 98480 | + | GH163 |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_78 | 98474 | 100246 | + | GH163 |
| pfam | HRGMv2_4047_4 | HRGMv2_4047_4_79 | 100320 | 104966 | + | Big_2 | Big_2 | Big_2 | Big_2 | Big_2 | Big-like |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_80 | 105082 | 108081 | + | GH38 |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_81 | 108084 | 109382 | + | GH28 |
| NULL(UNKNOWN) | HRGMv2_4047_4 | HRGMv2_4047_4_82 | 109382 | 111370 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_83 | 111373 | 112884 | + | GH28 |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_84 | 112896 | 113879 | + | GH29 |
| CAZyme | HRGMv2_4047_4 | HRGMv2_4047_4_85 | 113940 | 115037 | + | CE17 |
Gene ID: HRGMv2_4047_4_71
Type: CAZyme
Location: 83932 - 86700 (-)
Type: CAZyme
Location: 83932 - 86700 (-)
Gene ID: HRGMv2_4047_4_72
Type: CAZyme
Location: 87296 - 88240 (+)
Type: CAZyme
Location: 87296 - 88240 (+)
Gene ID: HRGMv2_4047_4_73
Type:
Location: 88334 - 89992 (+)
Type:
Location: 88334 - 89992 (+)
Gene ID: HRGMv2_4047_4_74
Type:
Location: 90087 - 91085 (+)
Type:
Location: 90087 - 91085 (+)
Gene ID: HRGMv2_4047_4_75
Type: TC
Location: 91072 - 92091 (+)
Type: TC
Location: 91072 - 92091 (+)
Gene ID: HRGMv2_4047_4_76
Type:
Location: 92121 - 96554 (+)
Type:
Location: 92121 - 96554 (+)
Gene ID: HRGMv2_4047_4_77
Type: CAZyme
Location: 96567 - 98480 (+)
Type: CAZyme
Location: 96567 - 98480 (+)
Gene ID: HRGMv2_4047_4_78
Type: CAZyme
Location: 98474 - 100246 (+)
Type: CAZyme
Location: 98474 - 100246 (+)
Gene ID: HRGMv2_4047_4_79
Type: pfam
Location: 100320 - 104966 (+)
Type: pfam
Location: 100320 - 104966 (+)
Gene ID: HRGMv2_4047_4_80
Type: CAZyme
Location: 105082 - 108081 (+)
Type: CAZyme
Location: 105082 - 108081 (+)
Gene ID: HRGMv2_4047_4_81
Type: CAZyme
Location: 108084 - 109382 (+)
Type: CAZyme
Location: 108084 - 109382 (+)
Gene ID: HRGMv2_4047_4_82
Type:
Location: 109382 - 111370 (+)
Type:
Location: 109382 - 111370 (+)
Gene ID: HRGMv2_4047_4_83
Type: CAZyme
Location: 111373 - 112884 (+)
Type: CAZyme
Location: 111373 - 112884 (+)
Gene ID: HRGMv2_4047_4_84
Type: CAZyme
Location: 112896 - 113879 (+)
Type: CAZyme
Location: 112896 - 113879 (+)
Gene ID: HRGMv2_4047_4_85
Type: CAZyme
Location: 113940 - 115037 (+)
Type: CAZyme
Location: 113940 - 115037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944363555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.