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Cluster: HRGMv2_4046_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4046_9 HRGMv2_4046_9_35 47911 48927 + GH130_4
STP HRGMv2_4046_9 HRGMv2_4046_9_36 48933 50237 + SBP_bac_1
TC HRGMv2_4046_9 HRGMv2_4046_9_37 50252 51166 + 3.A.1.1.11
TC HRGMv2_4046_9 HRGMv2_4046_9_38 51178 52050 + 3.A.1.1.36
CAZyme HRGMv2_4046_9 HRGMv2_4046_9_39 52047 52973 + GT108
CAZyme HRGMv2_4046_9 HRGMv2_4046_9_40 52970 54298 + CBM38
NULL(UNKNOWN) HRGMv2_4046_9 HRGMv2_4046_9_41 54311 54433 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4046_9 HRGMv2_4046_9_42 54430 58140 + CBM_X2
CAZyme HRGMv2_4046_9 HRGMv2_4046_9_43 58162 60579 + CBM38 | GH125
CAZyme HRGMv2_4046_9 HRGMv2_4046_9_44 60589 63132 + CBM32 | CBM32 | GH130
Gene ID: HRGMv2_4046_9_35
Type: CAZyme
Location: 47911 - 48927 (+)
Gene ID: HRGMv2_4046_9_36
Type: STP
Location: 48933 - 50237 (+)
Gene ID: HRGMv2_4046_9_37
Type: TC
Location: 50252 - 51166 (+)
Gene ID: HRGMv2_4046_9_38
Type: TC
Location: 51178 - 52050 (+)
Gene ID: HRGMv2_4046_9_39
Type: CAZyme
Location: 52047 - 52973 (+)
Gene ID: HRGMv2_4046_9_40
Type: CAZyme
Location: 52970 - 54298 (+)
Gene ID: HRGMv2_4046_9_41
Type:
Location: 54311 - 54433 (+)
Gene ID: HRGMv2_4046_9_42
Type: pfam
Location: 54430 - 58140 (+)
Gene ID: HRGMv2_4046_9_43
Type: CAZyme
Location: 58162 - 60579 (+)
Gene ID: HRGMv2_4046_9_44
Type: CAZyme
Location: 60589 - 63132 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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