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Cluster: HRGMv2_4046_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4046_6 HRGMv2_4046_6_75 69728 71470 - GH35
CAZyme HRGMv2_4046_6 HRGMv2_4046_6_76 71477 74206 - GH2
CAZyme HRGMv2_4046_6 HRGMv2_4046_6_77 74217 76637 - GH31_15
TC HRGMv2_4046_6 HRGMv2_4046_6_78 76652 78424 - 3.A.1.1.26
TC HRGMv2_4046_6 HRGMv2_4046_6_79 78427 79362 - 3.A.1.1.36
TC HRGMv2_4046_6 HRGMv2_4046_6_80 79355 80392 - 3.A.1.1.20
pfam HRGMv2_4046_6 HRGMv2_4046_6_81 80408 81865 - SBP_bac_1
CAZyme HRGMv2_4046_6 HRGMv2_4046_6_82 81887 83857 - GH97
Gene ID: HRGMv2_4046_6_75
Type: CAZyme
Location: 69728 - 71470 (-)
Gene ID: HRGMv2_4046_6_76
Type: CAZyme
Location: 71477 - 74206 (-)
Gene ID: HRGMv2_4046_6_77
Type: CAZyme
Location: 74217 - 76637 (-)
Gene ID: HRGMv2_4046_6_78
Type: TC
Location: 76652 - 78424 (-)
Gene ID: HRGMv2_4046_6_79
Type: TC
Location: 78427 - 79362 (-)
Gene ID: HRGMv2_4046_6_80
Type: TC
Location: 79355 - 80392 (-)
Gene ID: HRGMv2_4046_6_81
Type: pfam
Location: 80408 - 81865 (-)
Gene ID: HRGMv2_4046_6_82
Type: CAZyme
Location: 81887 - 83857 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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