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Cluster: HRGMv2_4046_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4046_32 HRGMv2_4046_32_4 2673 4607 - GH163
NULL(UNKNOWN) HRGMv2_4046_32 HRGMv2_4046_32_5 4698 7031 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4046_32 HRGMv2_4046_32_6 7045 10068 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4046_32 HRGMv2_4046_32_7 10085 11017 - 3.A.1.1.20
pfam HRGMv2_4046_32 HRGMv2_4046_32_8 11019 11972 - BPD_transp_1
NULL(UNKNOWN) HRGMv2_4046_32 HRGMv2_4046_32_9 11994 13670 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4046_32 HRGMv2_4046_32_10 13956 16472 + GH94
pfam HRGMv2_4046_32 HRGMv2_4046_32_11 16573 17811 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_4046_32 HRGMv2_4046_32_12 17862 20351 + GH31_15
Gene ID: HRGMv2_4046_32_4
Type: CAZyme
Location: 2673 - 4607 (-)
Gene ID: HRGMv2_4046_32_5
Type:
Location: 4698 - 7031 (-)
Gene ID: HRGMv2_4046_32_6
Type:
Location: 7045 - 10068 (-)
Gene ID: HRGMv2_4046_32_7
Type: TC
Location: 10085 - 11017 (-)
Gene ID: HRGMv2_4046_32_8
Type: pfam
Location: 11019 - 11972 (-)
Gene ID: HRGMv2_4046_32_9
Type:
Location: 11994 - 13670 (-)
Gene ID: HRGMv2_4046_32_10
Type: CAZyme
Location: 13956 - 16472 (+)
Gene ID: HRGMv2_4046_32_11
Type: pfam
Location: 16573 - 17811 (+)
Gene ID: HRGMv2_4046_32_12
Type: CAZyme
Location: 17862 - 20351 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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