Cluster: HRGMv2_4046_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4046
- CGC Family ID: CGCFAM_03352
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4046_17 | HRGMv2_4046_17_33 | 28317 | 30485 | - | 3.A.16.1.1 |
| NULL(UNKNOWN) | HRGMv2_4046_17 | HRGMv2_4046_17_34 | 32983 | 33765 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4046_17 | HRGMv2_4046_17_35 | 34688 | 35164 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4046_17 | HRGMv2_4046_17_36 | 38465 | 40465 | + | GH3 |
| CAZyme | HRGMv2_4046_17 | HRGMv2_4046_17_37 | 40732 | 41889 | - | GT4 |
Gene ID: HRGMv2_4046_17_33
Type: TC
Location: 28317 - 30485 (-)
Type: TC
Location: 28317 - 30485 (-)
Gene ID: HRGMv2_4046_17_34
Type:
Location: 32983 - 33765 (-)
Type:
Location: 32983 - 33765 (-)
Gene ID: HRGMv2_4046_17_35
Type:
Location: 34688 - 35164 (-)
Type:
Location: 34688 - 35164 (-)
Gene ID: HRGMv2_4046_17_36
Type: CAZyme
Location: 38465 - 40465 (+)
Type: CAZyme
Location: 38465 - 40465 (+)
Gene ID: HRGMv2_4046_17_37
Type: CAZyme
Location: 40732 - 41889 (-)
Type: CAZyme
Location: 40732 - 41889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944369635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.