Cluster: HRGMv2_4046_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4046
- CGC Family ID: CGCFAM_01253
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4046_14 | HRGMv2_4046_14_35 | 36839 | 39766 | + | GH38 |
| STP | HRGMv2_4046_14 | HRGMv2_4046_14_36 | 40233 | 41132 | + | PfkB |
| CAZyme | HRGMv2_4046_14 | HRGMv2_4046_14_37 | 41217 | 44765 | + | CBM66 | GH32 |
| TF | HRGMv2_4046_14 | HRGMv2_4046_14_38 | 44752 | 45738 | + | LacI |
| STP | HRGMv2_4046_14 | HRGMv2_4046_14_39 | 45916 | 47235 | + | SBP_bac_1 |
| TC | HRGMv2_4046_14 | HRGMv2_4046_14_40 | 47258 | 48241 | + | 3.A.1.1.20 |
| TC | HRGMv2_4046_14 | HRGMv2_4046_14_41 | 48243 | 49127 | + | 3.A.1.1.20 |
| CAZyme | HRGMv2_4046_14 | HRGMv2_4046_14_42 | 49144 | 51609 | + | GH32 |
| CAZyme | HRGMv2_4046_14 | HRGMv2_4046_14_43 | 51622 | 53499 | + | CBM38 | CBM38 | CBM38 |
| NULL(UNKNOWN) | HRGMv2_4046_14 | HRGMv2_4046_14_44 | 53512 | 53649 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4046_14 | HRGMv2_4046_14_45 | 53662 | 55485 | + | CBM38 |
| CAZyme | HRGMv2_4046_14 | HRGMv2_4046_14_46 | 55540 | 56901 | + | GH32 |
Gene ID: HRGMv2_4046_14_35
Type: CAZyme
Location: 36839 - 39766 (+)
Type: CAZyme
Location: 36839 - 39766 (+)
Gene ID: HRGMv2_4046_14_36
Type: STP
Location: 40233 - 41132 (+)
Type: STP
Location: 40233 - 41132 (+)
Gene ID: HRGMv2_4046_14_37
Type: CAZyme
Location: 41217 - 44765 (+)
Type: CAZyme
Location: 41217 - 44765 (+)
Gene ID: HRGMv2_4046_14_38
Type: TF
Location: 44752 - 45738 (+)
Type: TF
Location: 44752 - 45738 (+)
Gene ID: HRGMv2_4046_14_39
Type: STP
Location: 45916 - 47235 (+)
Type: STP
Location: 45916 - 47235 (+)
Gene ID: HRGMv2_4046_14_40
Type: TC
Location: 47258 - 48241 (+)
Type: TC
Location: 47258 - 48241 (+)
Gene ID: HRGMv2_4046_14_41
Type: TC
Location: 48243 - 49127 (+)
Type: TC
Location: 48243 - 49127 (+)
Gene ID: HRGMv2_4046_14_42
Type: CAZyme
Location: 49144 - 51609 (+)
Type: CAZyme
Location: 49144 - 51609 (+)
Gene ID: HRGMv2_4046_14_43
Type: CAZyme
Location: 51622 - 53499 (+)
Type: CAZyme
Location: 51622 - 53499 (+)
Gene ID: HRGMv2_4046_14_44
Type:
Location: 53512 - 53649 (+)
Type:
Location: 53512 - 53649 (+)
Gene ID: HRGMv2_4046_14_45
Type: CAZyme
Location: 53662 - 55485 (+)
Type: CAZyme
Location: 53662 - 55485 (+)
Gene ID: HRGMv2_4046_14_46
Type: CAZyme
Location: 55540 - 56901 (+)
Type: CAZyme
Location: 55540 - 56901 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944369635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.