Cluster: HRGMv2_4041_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_02720
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4041_6 | HRGMv2_4041_6_2 | 642 | 2972 | - | GH31_15 |
| CAZyme | HRGMv2_4041_6 | HRGMv2_4041_6_3 | 2969 | 4267 | - | GH13 |
| TC | HRGMv2_4041_6 | HRGMv2_4041_6_4 | 4333 | 5157 | - | 3.A.1.1.36 |
| TC | HRGMv2_4041_6 | HRGMv2_4041_6_5 | 5169 | 6056 | - | 3.A.1.1.36 |
Gene ID: HRGMv2_4041_6_2
Type: CAZyme
Location: 642 - 2972 (-)
Type: CAZyme
Location: 642 - 2972 (-)
Gene ID: HRGMv2_4041_6_3
Type: CAZyme
Location: 2969 - 4267 (-)
Type: CAZyme
Location: 2969 - 4267 (-)
Gene ID: HRGMv2_4041_6_4
Type: TC
Location: 4333 - 5157 (-)
Type: TC
Location: 4333 - 5157 (-)
Gene ID: HRGMv2_4041_6_5
Type: TC
Location: 5169 - 6056 (-)
Type: TC
Location: 5169 - 6056 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.