Cluster: HRGMv2_4041_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_10527
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_92 | HRGMv2_4041_92_8 | 5812 | 7224 | - | 2.A.40.1.2 |
| pfam | HRGMv2_4041_92 | HRGMv2_4041_92_9 | 7473 | 8108 | - | CAT |
| NULL(UNKNOWN) | HRGMv2_4041_92 | HRGMv2_4041_92_10 | 8142 | 8264 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4041_92 | HRGMv2_4041_92_11 | 8324 | 9178 | - | GT5 |
Gene ID: HRGMv2_4041_92_8
Type: TC
Location: 5812 - 7224 (-)
Type: TC
Location: 5812 - 7224 (-)
Gene ID: HRGMv2_4041_92_9
Type: pfam
Location: 7473 - 8108 (-)
Type: pfam
Location: 7473 - 8108 (-)
Gene ID: HRGMv2_4041_92_10
Type:
Location: 8142 - 8264 (+)
Type:
Location: 8142 - 8264 (+)
Gene ID: HRGMv2_4041_92_11
Type: CAZyme
Location: 8324 - 9178 (-)
Type: CAZyme
Location: 8324 - 9178 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.