Cluster: HRGMv2_4041_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_06989
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_83 | HRGMv2_4041_83_1 | 142 | 735 | - | 4.F.1.1.7 |
| CAZyme | HRGMv2_4041_83 | HRGMv2_4041_83_2 | 861 | 2648 | - | GH13_39 |
| TF | HRGMv2_4041_83 | HRGMv2_4041_83_3 | 3030 | 3521 | + | GerE |
| NULL(UNKNOWN) | HRGMv2_4041_83 | HRGMv2_4041_83_4 | 3518 | 4465 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4041_83 | HRGMv2_4041_83_5 | 4960 | 5814 | - | 2.A.115.1.2 |
Gene ID: HRGMv2_4041_83_1
Type: TC
Location: 142 - 735 (-)
Type: TC
Location: 142 - 735 (-)
Gene ID: HRGMv2_4041_83_2
Type: CAZyme
Location: 861 - 2648 (-)
Type: CAZyme
Location: 861 - 2648 (-)
Gene ID: HRGMv2_4041_83_3
Type: TF
Location: 3030 - 3521 (+)
Type: TF
Location: 3030 - 3521 (+)
Gene ID: HRGMv2_4041_83_4
Type:
Location: 3518 - 4465 (+)
Type:
Location: 3518 - 4465 (+)
Gene ID: HRGMv2_4041_83_5
Type: TC
Location: 4960 - 5814 (-)
Type: TC
Location: 4960 - 5814 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.