Cluster: HRGMv2_4041_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_53 | HRGMv2_4041_53_9 | 8199 | 9104 | + | 3.A.1.1.25 |
| TC | HRGMv2_4041_53 | HRGMv2_4041_53_10 | 9094 | 9939 | + | 3.A.1.1.46 |
| pfam | HRGMv2_4041_53 | HRGMv2_4041_53_11 | 9990 | 11120 | + | MR_MLE_N | MR_MLE_C |
| CAZyme | HRGMv2_4041_53 | HRGMv2_4041_53_12 | 11148 | 14225 | - | GH2 |
| TC | HRGMv2_4041_53 | HRGMv2_4041_53_13 | 14405 | 15742 | + | 3.A.1.204.1 |
Gene ID: HRGMv2_4041_53_9
Type: TC
Location: 8199 - 9104 (+)
Type: TC
Location: 8199 - 9104 (+)
Gene ID: HRGMv2_4041_53_10
Type: TC
Location: 9094 - 9939 (+)
Type: TC
Location: 9094 - 9939 (+)
Gene ID: HRGMv2_4041_53_11
Type: pfam
Location: 9990 - 11120 (+)
Type: pfam
Location: 9990 - 11120 (+)
Gene ID: HRGMv2_4041_53_12
Type: CAZyme
Location: 11148 - 14225 (-)
Type: CAZyme
Location: 11148 - 14225 (-)
Gene ID: HRGMv2_4041_53_13
Type: TC
Location: 14405 - 15742 (+)
Type: TC
Location: 14405 - 15742 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.