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Cluster: HRGMv2_4041_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4041_45 HRGMv2_4041_45_5 6200 6547 + 3.A.11.2.1
pfam HRGMv2_4041_45 HRGMv2_4041_45_6 6560 8086 + HMGL-like | LeuA_dimer | HCS_D2
TC HRGMv2_4041_45 HRGMv2_4041_45_7 8091 8720 + 9.B.18.1.3
pfam HRGMv2_4041_45 HRGMv2_4041_45_8 8717 9568 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10
CAZyme HRGMv2_4041_45 HRGMv2_4041_45_9 9565 10692 + GT4
pfam HRGMv2_4041_45 HRGMv2_4041_45_10 10707 11858 + Glyco_trans_1_4
CAZyme HRGMv2_4041_45 HRGMv2_4041_45_11 11843 13084 + GT4
pfam HRGMv2_4041_45 HRGMv2_4041_45_12 13110 14423 + Glyco_trans_1_4
NULL(UNKNOWN) HRGMv2_4041_45 HRGMv2_4041_45_13 14461 14982 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4041_45 HRGMv2_4041_45_14 15191 15892 + 3.A.1.122.14
Gene ID: HRGMv2_4041_45_5
Type: TC
Location: 6200 - 6547 (+)
Gene ID: HRGMv2_4041_45_6
Type: pfam
Location: 6560 - 8086 (+)
Gene ID: HRGMv2_4041_45_7
Type: TC
Location: 8091 - 8720 (+)
Gene ID: HRGMv2_4041_45_8
Type: pfam
Location: 8717 - 9568 (+)
Gene ID: HRGMv2_4041_45_9
Type: CAZyme
Location: 9565 - 10692 (+)
Gene ID: HRGMv2_4041_45_10
Type: pfam
Location: 10707 - 11858 (+)
Gene ID: HRGMv2_4041_45_11
Type: CAZyme
Location: 11843 - 13084 (+)
Gene ID: HRGMv2_4041_45_12
Type: pfam
Location: 13110 - 14423 (+)
Gene ID: HRGMv2_4041_45_13
Type:
Location: 14461 - 14982 (+)
Gene ID: HRGMv2_4041_45_14
Type: TC
Location: 15191 - 15892 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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