Cluster: HRGMv2_4041_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_00091
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_1 | HRGMv2_4041_1_71 | 76117 | 76803 | + | 9.B.20.1.4 |
| NULL(UNKNOWN) | HRGMv2_4041_1 | HRGMv2_4041_1_72 | 76979 | 77320 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4041_1 | HRGMv2_4041_1_73 | 77315 | 78517 | - | Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4 |
| CAZyme | HRGMv2_4041_1 | HRGMv2_4041_1_74 | 78514 | 79722 | - | GT4 |
| CAZyme | HRGMv2_4041_1 | HRGMv2_4041_1_75 | 79723 | 80919 | - | GT4 |
Gene ID: HRGMv2_4041_1_71
Type: TC
Location: 76117 - 76803 (+)
Type: TC
Location: 76117 - 76803 (+)
Gene ID: HRGMv2_4041_1_72
Type:
Location: 76979 - 77320 (+)
Type:
Location: 76979 - 77320 (+)
Gene ID: HRGMv2_4041_1_73
Type: pfam
Location: 77315 - 78517 (-)
Type: pfam
Location: 77315 - 78517 (-)
Gene ID: HRGMv2_4041_1_74
Type: CAZyme
Location: 78514 - 79722 (-)
Type: CAZyme
Location: 78514 - 79722 (-)
Gene ID: HRGMv2_4041_1_75
Type: CAZyme
Location: 79723 - 80919 (-)
Type: CAZyme
Location: 79723 - 80919 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.