Cluster: HRGMv2_4041_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_41 | HRGMv2_4041_41_4 | 2166 | 2933 | + | 3.A.1.134.4 |
| TC | HRGMv2_4041_41 | HRGMv2_4041_41_5 | 2926 | 4896 | + | 3.A.1.134.9 |
| NULL(UNKNOWN) | HRGMv2_4041_41 | HRGMv2_4041_41_6 | 4907 | 5068 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4041_41 | HRGMv2_4041_41_7 | 5109 | 7826 | - | GT51 |
| TC | HRGMv2_4041_41 | HRGMv2_4041_41_8 | 7994 | 9397 | + | 3.A.16.1.2 |
Gene ID: HRGMv2_4041_41_4
Type: TC
Location: 2166 - 2933 (+)
Type: TC
Location: 2166 - 2933 (+)
Gene ID: HRGMv2_4041_41_5
Type: TC
Location: 2926 - 4896 (+)
Type: TC
Location: 2926 - 4896 (+)
Gene ID: HRGMv2_4041_41_6
Type:
Location: 4907 - 5068 (+)
Type:
Location: 4907 - 5068 (+)
Gene ID: HRGMv2_4041_41_7
Type: CAZyme
Location: 5109 - 7826 (-)
Type: CAZyme
Location: 5109 - 7826 (-)
Gene ID: HRGMv2_4041_41_8
Type: TC
Location: 7994 - 9397 (+)
Type: TC
Location: 7994 - 9397 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4041_41_4 | vegetarian > vegan | 1.47427 | 0.00038 |