Cluster: HRGMv2_4041_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_03218
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_40 | HRGMv2_4041_40_2 | 291 | 1160 | + | 3.A.1.1.45 |
| TC | HRGMv2_4041_40 | HRGMv2_4041_40_3 | 1157 | 2008 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_4041_40 | HRGMv2_4041_40_4 | 2021 | 4309 | + | GH65 |
| TC | HRGMv2_4041_40 | HRGMv2_4041_40_5 | 4313 | 5524 | - | 2.A.1.31.2 |
Gene ID: HRGMv2_4041_40_2
Type: TC
Location: 291 - 1160 (+)
Type: TC
Location: 291 - 1160 (+)
Gene ID: HRGMv2_4041_40_3
Type: TC
Location: 1157 - 2008 (+)
Type: TC
Location: 1157 - 2008 (+)
Gene ID: HRGMv2_4041_40_4
Type: CAZyme
Location: 2021 - 4309 (+)
Type: CAZyme
Location: 2021 - 4309 (+)
Gene ID: HRGMv2_4041_40_5
Type: TC
Location: 4313 - 5524 (-)
Type: TC
Location: 4313 - 5524 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.