Cluster: HRGMv2_4041_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_05640
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4041_38 | HRGMv2_4041_38_11 | 9604 | 10575 | + | GH43_26 |
| TC | HRGMv2_4041_38 | HRGMv2_4041_38_12 | 10580 | 12352 | - | 3.A.1.135.5 |
| TC | HRGMv2_4041_38 | HRGMv2_4041_38_13 | 12369 | 14117 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4041_38_11
Type: CAZyme
Location: 9604 - 10575 (+)
Type: CAZyme
Location: 9604 - 10575 (+)
Gene ID: HRGMv2_4041_38_12
Type: TC
Location: 10580 - 12352 (-)
Type: TC
Location: 10580 - 12352 (-)
Gene ID: HRGMv2_4041_38_13
Type: TC
Location: 12369 - 14117 (-)
Type: TC
Location: 12369 - 14117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.