Cluster: HRGMv2_4041_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4041_38 | HRGMv2_4041_38_2 | 471 | 2360 | - | 3.A.3.6.16 |
| pfam | HRGMv2_4041_38 | HRGMv2_4041_38_3 | 2486 | 2761 | - | Trns_repr_metal |
| TF | HRGMv2_4041_38 | HRGMv2_4041_38_4 | 2922 | 3914 | + | LacI |
| CAZyme | HRGMv2_4041_38 | HRGMv2_4041_38_5 | 4009 | 4860 | - | GH51_1 |
Gene ID: HRGMv2_4041_38_2
Type: TC
Location: 471 - 2360 (-)
Type: TC
Location: 471 - 2360 (-)
Gene ID: HRGMv2_4041_38_3
Type: pfam
Location: 2486 - 2761 (-)
Type: pfam
Location: 2486 - 2761 (-)
Gene ID: HRGMv2_4041_38_4
Type: TF
Location: 2922 - 3914 (+)
Type: TF
Location: 2922 - 3914 (+)
Gene ID: HRGMv2_4041_38_5
Type: CAZyme
Location: 4009 - 4860 (-)
Type: CAZyme
Location: 4009 - 4860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.