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Cluster: HRGMv2_4041_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4041_20 HRGMv2_4041_20_10 9689 10654 - GT2
pfam HRGMv2_4041_20 HRGMv2_4041_20_11 10790 11989 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_4041_20 HRGMv2_4041_20_12 12041 13783 - Glyco_hydro_125
TC HRGMv2_4041_20 HRGMv2_4041_20_13 13867 15099 - 3.A.1.1.40
TC HRGMv2_4041_20 HRGMv2_4041_20_14 15163 16002 - 3.A.1.1.20
TC HRGMv2_4041_20 HRGMv2_4041_20_15 15995 16888 - 3.A.1.1.7
CAZyme HRGMv2_4041_20 HRGMv2_4041_20_16 16892 18868 - GH65
CAZyme HRGMv2_4041_20 HRGMv2_4041_20_17 18861 21089 - GH31_7
Gene ID: HRGMv2_4041_20_10
Type: CAZyme
Location: 9689 - 10654 (-)
Gene ID: HRGMv2_4041_20_11
Type: pfam
Location: 10790 - 11989 (-)
Gene ID: HRGMv2_4041_20_12
Type: pfam
Location: 12041 - 13783 (-)
Gene ID: HRGMv2_4041_20_13
Type: TC
Location: 13867 - 15099 (-)
Gene ID: HRGMv2_4041_20_14
Type: TC
Location: 15163 - 16002 (-)
Gene ID: HRGMv2_4041_20_15
Type: TC
Location: 15995 - 16888 (-)
Gene ID: HRGMv2_4041_20_16
Type: CAZyme
Location: 16892 - 18868 (-)
Gene ID: HRGMv2_4041_20_17
Type: CAZyme
Location: 18861 - 21089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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