Cluster: HRGMv2_4041_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4041_15 | HRGMv2_4041_15_4 | 4794 | 5723 | + | GH43_26 |
| pfam | HRGMv2_4041_15 | HRGMv2_4041_15_5 | 5919 | 7112 | + | Macro |
| NULL(UNKNOWN) | HRGMv2_4041_15 | HRGMv2_4041_15_6 | 7213 | 7857 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4041_15 | HRGMv2_4041_15_7 | 8178 | 8924 | - | 3.A.1.3.20 |
| TC | HRGMv2_4041_15 | HRGMv2_4041_15_8 | 8917 | 9711 | - | 3.A.1.3.20 |
| TC | HRGMv2_4041_15 | HRGMv2_4041_15_9 | 9794 | 10600 | - | 3.A.1.3.20 |
Gene ID: HRGMv2_4041_15_4
Type: CAZyme
Location: 4794 - 5723 (+)
Type: CAZyme
Location: 4794 - 5723 (+)
Gene ID: HRGMv2_4041_15_5
Type: pfam
Location: 5919 - 7112 (+)
Type: pfam
Location: 5919 - 7112 (+)
Gene ID: HRGMv2_4041_15_6
Type:
Location: 7213 - 7857 (+)
Type:
Location: 7213 - 7857 (+)
Gene ID: HRGMv2_4041_15_7
Type: TC
Location: 8178 - 8924 (-)
Type: TC
Location: 8178 - 8924 (-)
Gene ID: HRGMv2_4041_15_8
Type: TC
Location: 8917 - 9711 (-)
Type: TC
Location: 8917 - 9711 (-)
Gene ID: HRGMv2_4041_15_9
Type: TC
Location: 9794 - 10600 (-)
Type: TC
Location: 9794 - 10600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.