Cluster: HRGMv2_4041_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4041
- CGC Family ID: CGCFAM_01596
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4041_1 | HRGMv2_4041_1_38 | 44666 | 45781 | - | CE9 |
| TC | HRGMv2_4041_1 | HRGMv2_4041_1_39 | 45811 | 46845 | - | 3.A.1.11.1 |
| TC | HRGMv2_4041_1 | HRGMv2_4041_1_40 | 46937 | 47764 | - | 3.A.1.11.1 |
| TC | HRGMv2_4041_1 | HRGMv2_4041_1_41 | 47774 | 48634 | - | 3.A.1.11.1 |
| TC | HRGMv2_4041_1 | HRGMv2_4041_1_42 | 48635 | 49729 | - | 3.A.1.11.1 |
Gene ID: HRGMv2_4041_1_38
Type: CAZyme
Location: 44666 - 45781 (-)
Type: CAZyme
Location: 44666 - 45781 (-)
Gene ID: HRGMv2_4041_1_39
Type: TC
Location: 45811 - 46845 (-)
Type: TC
Location: 45811 - 46845 (-)
Gene ID: HRGMv2_4041_1_40
Type: TC
Location: 46937 - 47764 (-)
Type: TC
Location: 46937 - 47764 (-)
Gene ID: HRGMv2_4041_1_41
Type: TC
Location: 47774 - 48634 (-)
Type: TC
Location: 47774 - 48634 (-)
Gene ID: HRGMv2_4041_1_42
Type: TC
Location: 48635 - 49729 (-)
Type: TC
Location: 48635 - 49729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp944333375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.