Cluster: HRGMv2_4034_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4034
- CGC Family ID: CGCFAM_05403
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_108 | 116127 | 116471 | + | 3.A.5.1.1 |
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_109 | 116598 | 118505 | + | 2.A.6.4.1 |
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_110 | 118523 | 119455 | + | 2.A.6.4.1 |
| pfam | HRGMv2_4034_5 | HRGMv2_4034_5_111 | 119555 | 120172 | - | YrbL-PhoP_reg |
| CAZyme | HRGMv2_4034_5 | HRGMv2_4034_5_112 | 120169 | 120936 | - | GT25 |
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_113 | 120943 | 121317 | - | 2.A.7.34.3 |
Gene ID: HRGMv2_4034_5_108
Type: TC
Location: 116127 - 116471 (+)
Type: TC
Location: 116127 - 116471 (+)
Gene ID: HRGMv2_4034_5_109
Type: TC
Location: 116598 - 118505 (+)
Type: TC
Location: 116598 - 118505 (+)
Gene ID: HRGMv2_4034_5_110
Type: TC
Location: 118523 - 119455 (+)
Type: TC
Location: 118523 - 119455 (+)
Gene ID: HRGMv2_4034_5_111
Type: pfam
Location: 119555 - 120172 (-)
Type: pfam
Location: 119555 - 120172 (-)
Gene ID: HRGMv2_4034_5_112
Type: CAZyme
Location: 120169 - 120936 (-)
Type: CAZyme
Location: 120169 - 120936 (-)
Gene ID: HRGMv2_4034_5_113
Type: TC
Location: 120943 - 121317 (-)
Type: TC
Location: 120943 - 121317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.