Cluster: HRGMv2_4034_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4034
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_70 | 72256 | 73674 | - | 3.A.5.1.1 |
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_71 | 74002 | 74808 | + | 9.B.14.3.5 |
| NULL(UNKNOWN) | HRGMv2_4034_5 | HRGMv2_4034_5_72 | 74809 | 75084 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4034_5 | HRGMv2_4034_5_73 | 75065 | 75685 | + | Amidase_2 |
| TC | HRGMv2_4034_5 | HRGMv2_4034_5_74 | 75798 | 76349 | + | 9.A.4.1.2 |
| CAZyme | HRGMv2_4034_5 | HRGMv2_4034_5_75 | 76384 | 77832 | + | GT4 |
Gene ID: HRGMv2_4034_5_70
Type: TC
Location: 72256 - 73674 (-)
Type: TC
Location: 72256 - 73674 (-)
Gene ID: HRGMv2_4034_5_71
Type: TC
Location: 74002 - 74808 (+)
Type: TC
Location: 74002 - 74808 (+)
Gene ID: HRGMv2_4034_5_72
Type:
Location: 74809 - 75084 (+)
Type:
Location: 74809 - 75084 (+)
Gene ID: HRGMv2_4034_5_73
Type: pfam
Location: 75065 - 75685 (+)
Type: pfam
Location: 75065 - 75685 (+)
Gene ID: HRGMv2_4034_5_74
Type: TC
Location: 75798 - 76349 (+)
Type: TC
Location: 75798 - 76349 (+)
Gene ID: HRGMv2_4034_5_75
Type: CAZyme
Location: 76384 - 77832 (+)
Type: CAZyme
Location: 76384 - 77832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4034_5_70 | vegetarian > omnivore | 1.03162 | 0.03430 |