Cluster: HRGMv2_4032_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4032
- CGC Family ID: CGCFAM_00447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4032_17 | HRGMv2_4032_17_8 | 8726 | 10402 | - | 9.B.34.1.3 |
| STP | HRGMv2_4032_17 | HRGMv2_4032_17_9 | 10534 | 12171 | - | EAL |
| TC | HRGMv2_4032_17 | HRGMv2_4032_17_10 | 12215 | 13822 | - | 1.B.55.3.1 |
| STP | HRGMv2_4032_17 | HRGMv2_4032_17_11 | 13874 | 15529 | - | TPR_1 |
| CAZyme | HRGMv2_4032_17 | HRGMv2_4032_17_12 | 15531 | 16769 | - | GH8 |
| TC | HRGMv2_4032_17 | HRGMv2_4032_17_13 | 16781 | 19168 | - | 4.D.3.1.6 |
| CAZyme | HRGMv2_4032_17 | HRGMv2_4032_17_14 | 19189 | 21777 | - | GT2 |
Gene ID: HRGMv2_4032_17_8
Type: TC
Location: 8726 - 10402 (-)
Type: TC
Location: 8726 - 10402 (-)
Gene ID: HRGMv2_4032_17_9
Type: STP
Location: 10534 - 12171 (-)
Type: STP
Location: 10534 - 12171 (-)
Gene ID: HRGMv2_4032_17_10
Type: TC
Location: 12215 - 13822 (-)
Type: TC
Location: 12215 - 13822 (-)
Gene ID: HRGMv2_4032_17_11
Type: STP
Location: 13874 - 15529 (-)
Type: STP
Location: 13874 - 15529 (-)
Gene ID: HRGMv2_4032_17_12
Type: CAZyme
Location: 15531 - 16769 (-)
Type: CAZyme
Location: 15531 - 16769 (-)
Gene ID: HRGMv2_4032_17_13
Type: TC
Location: 16781 - 19168 (-)
Type: TC
Location: 16781 - 19168 (-)
Gene ID: HRGMv2_4032_17_14
Type: CAZyme
Location: 19189 - 21777 (-)
Type: CAZyme
Location: 19189 - 21777 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.