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Cluster: HRGMv2_4032_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4032_67 HRGMv2_4032_67_1 3 1376 + GT2
TC HRGMv2_4032_67 HRGMv2_4032_67_2 1406 3718 + 4.D.3.1.6
CAZyme HRGMv2_4032_67 HRGMv2_4032_67_3 3904 5316 + GH8
pfam HRGMv2_4032_67 HRGMv2_4032_67_4 5313 6968 + CBP_BcsG
TC HRGMv2_4032_67 HRGMv2_4032_67_5 7337 8287 - 8.A.21.2.2
pfam HRGMv2_4032_67 HRGMv2_4032_67_6 8291 8719 - NfeD
NULL(UNKNOWN) HRGMv2_4032_67 HRGMv2_4032_67_7 8716 9132 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4032_67 HRGMv2_4032_67_8 9559 9768 + 2.A.76.1.2
Gene ID: HRGMv2_4032_67_1
Type: CAZyme
Location: 3 - 1376 (+)
Gene ID: HRGMv2_4032_67_2
Type: TC
Location: 1406 - 3718 (+)
Gene ID: HRGMv2_4032_67_3
Type: CAZyme
Location: 3904 - 5316 (+)
Gene ID: HRGMv2_4032_67_4
Type: pfam
Location: 5313 - 6968 (+)
Gene ID: HRGMv2_4032_67_5
Type: TC
Location: 7337 - 8287 (-)
Gene ID: HRGMv2_4032_67_6
Type: pfam
Location: 8291 - 8719 (-)
Gene ID: HRGMv2_4032_67_7
Type:
Location: 8716 - 9132 (-)
Gene ID: HRGMv2_4032_67_8
Type: TC
Location: 9559 - 9768 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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