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Cluster: HRGMv2_4031_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4031_40 HRGMv2_4031_40_1 238 1467 - 2.A.23.4.1
TC HRGMv2_4031_40 HRGMv2_4031_40_2 1784 3706 + 1.B.33.2.4
pfam HRGMv2_4031_40 HRGMv2_4031_40_3 3706 7584 + TamB
CAZyme HRGMv2_4031_40 HRGMv2_4031_40_4 7656 8927 + GT30
TC HRGMv2_4031_40 HRGMv2_4031_40_5 9255 10673 + 2.A.25.1.5
pfam HRGMv2_4031_40 HRGMv2_4031_40_6 10730 14158 - tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger
TC HRGMv2_4031_40 HRGMv2_4031_40_7 14309 16495 - 1.B.14.2.7
Gene ID: HRGMv2_4031_40_1
Type: TC
Location: 238 - 1467 (-)
Gene ID: HRGMv2_4031_40_2
Type: TC
Location: 1784 - 3706 (+)
Gene ID: HRGMv2_4031_40_3
Type: pfam
Location: 3706 - 7584 (+)
Gene ID: HRGMv2_4031_40_4
Type: CAZyme
Location: 7656 - 8927 (+)
Gene ID: HRGMv2_4031_40_5
Type: TC
Location: 9255 - 10673 (+)
Gene ID: HRGMv2_4031_40_6
Type: pfam
Location: 10730 - 14158 (-)
Gene ID: HRGMv2_4031_40_7
Type: TC
Location: 14309 - 16495 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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