Cluster: HRGMv2_4029_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4029
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4029_1 | HRGMv2_4029_1_31 | 30787 | 31920 | + | 9.B.146.1.6 |
| pfam | HRGMv2_4029_1 | HRGMv2_4029_1_32 | 31931 | 33019 | + | Mur_ligase_M | MurD-like_N |
| pfam | HRGMv2_4029_1 | HRGMv2_4029_1_33 | 33037 | 33405 | + | Mur_ligase_C |
| TC | HRGMv2_4029_1 | HRGMv2_4029_1_34 | 33511 | 34686 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_4029_1 | HRGMv2_4029_1_35 | 34683 | 35810 | + | GT28 |
Gene ID: HRGMv2_4029_1_31
Type: TC
Location: 30787 - 31920 (+)
Type: TC
Location: 30787 - 31920 (+)
Gene ID: HRGMv2_4029_1_32
Type: pfam
Location: 31931 - 33019 (+)
Type: pfam
Location: 31931 - 33019 (+)
Gene ID: HRGMv2_4029_1_33
Type: pfam
Location: 33037 - 33405 (+)
Type: pfam
Location: 33037 - 33405 (+)
Gene ID: HRGMv2_4029_1_34
Type: TC
Location: 33511 - 34686 (+)
Type: TC
Location: 33511 - 34686 (+)
Gene ID: HRGMv2_4029_1_35
Type: CAZyme
Location: 34683 - 35810 (+)
Type: CAZyme
Location: 34683 - 35810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella sp944392755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.