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Cluster: HRGMv2_4028_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4028_49 HRGMv2_4028_49_37 34668 36605 + 3.A.1.5.11
TC HRGMv2_4028_49 HRGMv2_4028_49_38 36757 38307 + 3.A.1.5.11
TC HRGMv2_4028_49 HRGMv2_4028_49_39 38389 39309 + 3.A.1.5.11
TC HRGMv2_4028_49 HRGMv2_4028_49_40 39319 40218 + 3.A.1.5.11
peptidase HRGMv2_4028_49 HRGMv2_4028_49_41 40289 41347 + P01.UPW
STP HRGMv2_4028_49 HRGMv2_4028_49_42 41372 42199 - PfkB
CAZyme HRGMv2_4028_49 HRGMv2_4028_49_43 42169 43437 - GT30
CAZyme HRGMv2_4028_49 HRGMv2_4028_49_44 43482 44453 - GT9
Gene ID: HRGMv2_4028_49_37
Type: TC
Location: 34668 - 36605 (+)
Gene ID: HRGMv2_4028_49_38
Type: TC
Location: 36757 - 38307 (+)
Gene ID: HRGMv2_4028_49_39
Type: TC
Location: 38389 - 39309 (+)
Gene ID: HRGMv2_4028_49_40
Type: TC
Location: 39319 - 40218 (+)
Gene ID: HRGMv2_4028_49_41
Type: peptidase
Location: 40289 - 41347 (+)
Gene ID: HRGMv2_4028_49_42
Type: STP
Location: 41372 - 42199 (-)
Gene ID: HRGMv2_4028_49_43
Type: CAZyme
Location: 42169 - 43437 (-)
Gene ID: HRGMv2_4028_49_44
Type: CAZyme
Location: 43482 - 44453 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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