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Cluster: HRGMv2_4028_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4028_45 HRGMv2_4028_45_41 46480 48429 + 1.A.33.1.2
sulfatase HRGMv2_4028_45 HRGMv2_4028_45_42 48607 49752 + S1_7
pfam HRGMv2_4028_45 HRGMv2_4028_45_43 49855 50394 + Rubrerythrin | RUBY_RBDX
TC HRGMv2_4028_45 HRGMv2_4028_45_44 50590 51336 - 2.A.122.2.2
TC HRGMv2_4028_45 HRGMv2_4028_45_45 51348 51695 - 1.E.14.1.7
CAZyme HRGMv2_4028_45 HRGMv2_4028_45_46 52353 53552 - GT4
CAZyme HRGMv2_4028_45 HRGMv2_4028_45_47 53549 54748 - GT4
TC HRGMv2_4028_45 HRGMv2_4028_45_48 54799 56484 - 4.C.1.1.4
Gene ID: HRGMv2_4028_45_41
Type: TC
Location: 46480 - 48429 (+)
Gene ID: HRGMv2_4028_45_42
Type: sulfatase
Location: 48607 - 49752 (+)
Gene ID: HRGMv2_4028_45_43
Type: pfam
Location: 49855 - 50394 (+)
Gene ID: HRGMv2_4028_45_44
Type: TC
Location: 50590 - 51336 (-)
Gene ID: HRGMv2_4028_45_45
Type: TC
Location: 51348 - 51695 (-)
Gene ID: HRGMv2_4028_45_46
Type: CAZyme
Location: 52353 - 53552 (-)
Gene ID: HRGMv2_4028_45_47
Type: CAZyme
Location: 53549 - 54748 (-)
Gene ID: HRGMv2_4028_45_48
Type: TC
Location: 54799 - 56484 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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