Cluster: HRGMv2_4015_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4015
- CGC Family ID: CGCFAM_01616
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4015_15 | HRGMv2_4015_15_7 | 7587 | 8342 | + | GT2 |
| CAZyme | HRGMv2_4015_15 | HRGMv2_4015_15_8 | 8342 | 9157 | + | GT2 |
| CAZyme | HRGMv2_4015_15 | HRGMv2_4015_15_9 | 9204 | 10094 | - | GT9 |
| TC | HRGMv2_4015_15 | HRGMv2_4015_15_10 | 10239 | 11999 | + | 3.A.1.106.1 |
| pfam | HRGMv2_4015_15 | HRGMv2_4015_15_11 | 12085 | 13464 | + | SDH_alpha | SDH_beta |
| TC | HRGMv2_4015_15 | HRGMv2_4015_15_12 | 13433 | 14404 | + | 2.A.7.3.19 |
Gene ID: HRGMv2_4015_15_7
Type: CAZyme
Location: 7587 - 8342 (+)
Type: CAZyme
Location: 7587 - 8342 (+)
Gene ID: HRGMv2_4015_15_8
Type: CAZyme
Location: 8342 - 9157 (+)
Type: CAZyme
Location: 8342 - 9157 (+)
Gene ID: HRGMv2_4015_15_9
Type: CAZyme
Location: 9204 - 10094 (-)
Type: CAZyme
Location: 9204 - 10094 (-)
Gene ID: HRGMv2_4015_15_10
Type: TC
Location: 10239 - 11999 (+)
Type: TC
Location: 10239 - 11999 (+)
Gene ID: HRGMv2_4015_15_11
Type: pfam
Location: 12085 - 13464 (+)
Type: pfam
Location: 12085 - 13464 (+)
Gene ID: HRGMv2_4015_15_12
Type: TC
Location: 13433 - 14404 (+)
Type: TC
Location: 13433 - 14404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella sp905186105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.