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Cluster: HRGMv2_4015_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4015_7 HRGMv2_4015_7_31 35817 37151 - 2.A.22.5.3
TC HRGMv2_4015_7 HRGMv2_4015_7_32 37240 38577 - 2.A.22.5.3
TC HRGMv2_4015_7 HRGMv2_4015_7_33 38682 40022 - 2.A.22.5.3
pfam HRGMv2_4015_7 HRGMv2_4015_7_34 40489 41223 + SIMPL
pfam HRGMv2_4015_7 HRGMv2_4015_7_35 41393 42040 + PS_Dcarbxylase
CAZyme HRGMv2_4015_7 HRGMv2_4015_7_36 42445 45030 + GT2
TC HRGMv2_4015_7 HRGMv2_4015_7_37 45033 47261 + 4.D.3.1.6
CAZyme HRGMv2_4015_7 HRGMv2_4015_7_38 47258 48334 + GH8
Gene ID: HRGMv2_4015_7_31
Type: TC
Location: 35817 - 37151 (-)
Gene ID: HRGMv2_4015_7_32
Type: TC
Location: 37240 - 38577 (-)
Gene ID: HRGMv2_4015_7_33
Type: TC
Location: 38682 - 40022 (-)
Gene ID: HRGMv2_4015_7_34
Type: pfam
Location: 40489 - 41223 (+)
Gene ID: HRGMv2_4015_7_35
Type: pfam
Location: 41393 - 42040 (+)
Gene ID: HRGMv2_4015_7_36
Type: CAZyme
Location: 42445 - 45030 (+)
Gene ID: HRGMv2_4015_7_37
Type: TC
Location: 45033 - 47261 (+)
Gene ID: HRGMv2_4015_7_38
Type: CAZyme
Location: 47258 - 48334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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