Cluster: HRGMv2_4015_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4015
- CGC Family ID: CGCFAM_00469
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4015_4 | HRGMv2_4015_4_4 | 2453 | 4012 | - | 2.A.68.1.2 |
| pfam | HRGMv2_4015_4 | HRGMv2_4015_4_5 | 4311 | 5267 | - | CDP-OH_P_transf |
| sulfatase | HRGMv2_4015_4 | HRGMv2_4015_4_6 | 5451 | 6131 | - | S1_56 |
| CAZyme | HRGMv2_4015_4 | HRGMv2_4015_4_7 | 6185 | 7321 | - | GH103 |
| pfam | HRGMv2_4015_4 | HRGMv2_4015_4_8 | 7518 | 8486 | + | Hist_deacetyl |
| TC | HRGMv2_4015_4 | HRGMv2_4015_4_9 | 8548 | 9864 | + | 2.A.1.24.3 |
Gene ID: HRGMv2_4015_4_4
Type: TC
Location: 2453 - 4012 (-)
Type: TC
Location: 2453 - 4012 (-)
Gene ID: HRGMv2_4015_4_5
Type: pfam
Location: 4311 - 5267 (-)
Type: pfam
Location: 4311 - 5267 (-)
Gene ID: HRGMv2_4015_4_6
Type: sulfatase
Location: 5451 - 6131 (-)
Type: sulfatase
Location: 5451 - 6131 (-)
Gene ID: HRGMv2_4015_4_7
Type: CAZyme
Location: 6185 - 7321 (-)
Type: CAZyme
Location: 6185 - 7321 (-)
Gene ID: HRGMv2_4015_4_8
Type: pfam
Location: 7518 - 8486 (+)
Type: pfam
Location: 7518 - 8486 (+)
Gene ID: HRGMv2_4015_4_9
Type: TC
Location: 8548 - 9864 (+)
Type: TC
Location: 8548 - 9864 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella sp905186105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.