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Cluster: HRGMv2_4014_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4014_11 HRGMv2_4014_11_26 31101 32603 - GH8
TC HRGMv2_4014_11 HRGMv2_4014_11_27 32622 34829 - 4.D.3.1.6
CAZyme HRGMv2_4014_11 HRGMv2_4014_11_28 34846 37413 - GT2
pfam HRGMv2_4014_11 HRGMv2_4014_11_29 38338 39300 + DDE_Tnp_1
pfam HRGMv2_4014_11 HRGMv2_4014_11_30 40195 40782 - RelB
TC HRGMv2_4014_11 HRGMv2_4014_11_31 41650 42990 - 2.A.26.1.9
pfam HRGMv2_4014_11 HRGMv2_4014_11_32 43416 44789 - Radical_SAM
TC HRGMv2_4014_11 HRGMv2_4014_11_33 44867 45535 - 2.A.76.1.9
Gene ID: HRGMv2_4014_11_26
Type: CAZyme
Location: 31101 - 32603 (-)
Gene ID: HRGMv2_4014_11_27
Type: TC
Location: 32622 - 34829 (-)
Gene ID: HRGMv2_4014_11_28
Type: CAZyme
Location: 34846 - 37413 (-)
Gene ID: HRGMv2_4014_11_29
Type: pfam
Location: 38338 - 39300 (+)
Gene ID: HRGMv2_4014_11_30
Type: pfam
Location: 40195 - 40782 (-)
Gene ID: HRGMv2_4014_11_31
Type: TC
Location: 41650 - 42990 (-)
Gene ID: HRGMv2_4014_11_32
Type: pfam
Location: 43416 - 44789 (-)
Gene ID: HRGMv2_4014_11_33
Type: TC
Location: 44867 - 45535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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